Useful Websites and Software

• Hardy-Weinberg equilibrium calculator: http://www.changbioscience.com/ genetics/hardy.html

• Bottleneck. Detects recent effective population size reductions from allele data frequencies: http://www.montpellier.inra.fr/URLB/bottleneck/bottleneck.html

• Analysis of molecular variance (AMOVA) is a method for studying molecular variation within a species: http://www.bioss.ac.uk/smart/unix/mamova/slides/ frames.htm

• FSTAT. Calculates genetic diversity and tests for differences in genetic diversity between groups of samples: http://www2.unil.ch/izea/softwares/fstat.html

• NeEstimator. Estimates the effective population sizes (Ne) from allele frequency data: http://www.dpi.qld.gov.au/fishweb/13887.html

• MLNE. A program for calculating maximum likelihood estimates of effective population size (Ne): http://www.zoo.cam.ac.uk/ioz/software.htmf MLNE

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