Useful Websites and Software

• Phragmites australis in the USA: Phragmts.html

• TCS - a computer program to estimate gene genealogies using networks: http://

• Phylip -- a package of programs for inferring phylogenies: http://evolution.

• Mesquite - a modular system for evolutionary analysis. Software for evolutionary biology with modules that include the reconstruction of bifurcating trees and coalescence simulations: mesquite.html

• DnaSP -- a software package that estimates several measures of DNA sequence variation within and between populations, quantifies recombination and gene flow, and uses coalescent-based models to estimate the confidence intervals of some test statistics:

• GEODIS - a tool to perform the nested clade phylogeographic analysis (NCPA):

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